Protein ZmGATA2 | |
---|---|
Information | |
TF Name: | ZmGATA2 |
Species: | Maize |
TF Family: | C2C2-GATA |
Gene Name(Synonym): | GATA2 |
Uniprot ID: | B4FVT9 |
Subgenome: | 2 |
ZmGATA2 is a protein in the C2C2-GATA family.
Overview of domains present in v5 transcripts | |
---|---|
PF00320 | |
Zm00001eb340790_T001 | |
Zm00001eb340790_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d009193 | DAPseq | sequence | fimo | position | |
Zm00001d009193 | DAPseq | sequence | fimo | position | |
Zm00001d009193 | ChIPseq | sequence | fimo | position | |
Zm00001d009193 | PChIPseq | sequence | fimo | position |
MSSAAGRAPAPTPMGSADRCKVHPSALVSALSSSPLLRALSSRSASCDPPLQIDGIVAAEKATRSCVECRATTTPMWRSG
PTGPRSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLS
SSPTSTLLHG
MSSAAGRAPAPTPMGSADRCKVHPSALVSALSSSPLLRALSSRSASCDPPLQIDGIVAAEKATRSCVECRATTTPMWRSG
PTGPRSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLS
SSPTSTLLHG
MSSAAGRAPAPTPMGSADRCKVHPSALVSALSSSPLLRALSSRSASCDPPLQIDGIVAAEKATRSCVECRATTTPMWRSG
PTGPRSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLS
SSPTSTLLHG
MSSAAGRAPAPTPMGSADRCKVHPSALVSALSSSPLLRALSSRSASCDPPLQIDGIVAAEKATRSCVECRATTTPMWRSG
PTGPRSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLS
SSPTSTLLHG
MSSAAGRAPAPTPMGSADRCKVHPSALVSALSSSPLLRALSSRSASCDPPLQIDGIVAAEKATRSCVECRATTTPMWRSG
PTGPRSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLS
SSPTSTLLHG
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00320 |
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Hover here to show all domains |
CACACACATCCCCCTTCCCTTCCCT...
CACACACATCCCCCTTCCCTTCCCTTCCCCGCAACTACCCTCTACTCTCTACTGCACGCTTCTACTATCTAAGAAACAACGCACACGGGCCGAAACTAAATTTCTCCAAGCGCGCAATCCTGTCGCCAACCCCGGCCACGGATCGGGGATGTCGTCTGCTGCGGGCCGCGCGCCGGCGCCGACGCCGATGGGCTCCGCCGATCGCTGTAAGGTACATCCATCGGCTCTCGTCTCCGCTCTCTCTTCCTCTCCTTTGCTCCGAGCTCTGTCATCCCGGTCTGCTTCCTGCGACCCGCCGTTGCAGATCGACGGGATCGTGGCGGCGGAGAAAGCCACCAGGAGCTGCGTCGAATGCCGCGCCACCACCACGCCCATGTGGCGCAGCGGCCCGACCGGGCCCAGGTCACTTTGCAACGCCTGTGGGATCCGGTACCGAAAAAAGAGGAGGCAAGAGCTTGGCCTAGACCGCAAGCTGCAGCAACAACAAAATAATGGCGAGGCGAAGACGGATGAAGCAAAAGACAGCTCTAGCAACAGCAGCAGCGGGAGCAGCAACTTGCAGGTGGTGCAGAAACGGAGGCTGCTAATGGGAGTGGAGGAGGCTGCTCTGCTGCTGATGACCCTATCTTCTTCGCCCACATCCACGTTGCTTCATGGATAAGGACCCTCCTCCAACGCCAGATCAGCAGTGTACATACAACGTACCCCCTGCACAGTGACTGCCGAACGATTGCAGGCCTATCTCAGGGTTGTGTGATCTTGTGATTGGGGCGGATTATTAGTGCCAAGCTAATCACTCCGTTGATCGTCTTGTCTTCCTCTGTTTTCGCCGCACCCGTAGATCTTGATGCCAGCCAGCCATATATCTTCTACGTGATTTGTGGTAGGCTCCATAATCAGAGGTCTGTTGATCCCATTCCCCCCGCACATCTTTTTTCTCTTGTCTTTTCTCTTTTTGGTTTTTTGTATGTACTTTGATGTTGCCCCATTTGTGAGGGATGGGTGATCAAAGAGGAGACGCCATCCCTTCTCGTTCTGGAATAATGGTCCAAATAATAAAGGATTTGAGCTGTTTTGTTTTGTTT
MSSAAGRAPAPTPMGSADRCKIDGIVAAEKATRSCVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQELGLDRKLQQ
QQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLSSSPTSTLLHG
CACACACATCCCCCTTCCCTTCCCT...
CACACACATCCCCCTTCCCTTCCCTTCCCCGCAACTACCCTCTACTCTCTACTGCACGCTTCTACTATCTAAGAAACAACGCACACGGGCCGAAACTAAATTTCTCCAAGCGCGCAATCCTGTCGCCAACCCCGGCCACGGATCGGGGATGTCGTCTGCTGCGGGCCGCGCGCCGGCGCCGACGCCGATGGGCTCCGCCGATCGCTGTAAGATCGACGGGATCGTGGCGGCGGAGAAAGCCACCAGGAGCTGCGTCGAATGCCGCGCCACCACCACGCCCATGTGGCGCAGCGGCCCGACCGGGCCCAGGTCACTTTGCAACGCCTGTGGGATCCGGTACCGAAAAAAGAGGAGGCAAGAGCTTGGCCTAGACCGCAAGCTGCAGCAACAACAAAATAATGGCGAGGCGAAGACGGATGAAGCAAAAGACAGCTCTAGCAACAGCAGCAGCGGGAGCAGCAACTTGCAGGTGGTGCAGAAACGGAGGCTGCTAATGGGAGTGGAGGAGGCTGCTCTGCTGCTGATGACCCTATCTTCTTCGCCCACATCCACGTTGCTTCATGGATAAGGACCCTCCTCCAACGCCAGATCAGCAGTGTACATACAACGTACCCCCTGCACAGTGACTGCCGAACGATTGCAGGCCTATCTCAGGGTTGTGTGATCTTGTGATTGGGGCGGATTATTAGTGCCAAGCTAATCACTCCGTTGATCGTCTTGTCTTCCTCTGTTTTCGCCGCACCCGTAGATCTTGATGCCAGCCAGCCATATATCTTCTACGTGATTTGTGGTAGGCTCCATAATCAGAGGTCTGTTGATCCCATTCCCCCCGCACATCTTTTTTCTCTTGTCTTTTCTCTTTTTGGTTTTTTGTATGTACTTTGATGTTGCCCCATTTGTGAGGGATGGGTGATCAAAGAGGAGACGCCATCCCTTCTCGTTCTGGAATAATGGTCCAAATAATAAAGGATTTGAGCTGTTTTGTTTTGTTT
MSSAAGRAPAPTPMGSADRCKIDGIVAAEKATRSCVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQELGLDRKLQQ
QQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLSSSPTSTLLHG
CCCGCAACTACCCTCTACTCTCTAC...
CCCGCAACTACCCTCTACTCTCTACTGCACGCTTCTACTATCTAAGAAACAACGCACACGGGCCGAAACTAAATTTCTCCAAGCGCGCAATCCTGTCGCCAACCCCGGCCACGGATCGGGGATGTCGTCTGCTGCGGGCCGCGCGCCGGCGCCGACGCCGATGGGCTCCGCCGATCGCTGTAAGATCGACGGGATCGTGGCGGCGGAGAAAGCCACCAGGAGCTGCGTCGAATGCCGCGCCACCACCACGCCCATGTGGCGCAGCGGCCCGACCGGGCCCAGGTCACTTTGCAACGCCTGTGGGATCCGGTACCGAAAAAAGAGGAGGCAAGAGCTTGGCCTAGACCGCAAGCTGCAGCAACAACAAAATAATGGCGAGGCGAAGACGGATGAAGCAAAAGACAGCTCTAGCAACAGCAGCAGCGGGAGCAGCAACTTGCAGGTGGTGCAGAAACGGAGGCTGCTAATGGGAGTGGAGGAGGCTGCTCTGCTGCTGATGACCCTATCTTCTTCGCCCACATCCACGTTGCTTCATGGATAAGGACCCTCCTCCAACGCCAGATCAGCAGTGTACATACAACGTACCCCCTGCACAGTGACTGCCGAACGATTGCAGGCCTATCTCAGGGTTGTGTGATCTTGTGATTGGGGCGGATTATTAGTGCCAAGCTAATCACTCCGTTGATCGTCTTGTCTTCCTCTGTTTTCGCCGCACCCGTAGATCTTGATGCCAGCCAGCCATATATCTTCTACGTGATTTGTGGTAGGCTCCATAATCAGAGGTCTGTTGATCCCATTCCCCCCGCACATCTTTTTTCTCTTGTCTTTTCTCTTTTTGGTTTTTTGTATGTACTTTGATGTTGCCCCATTTGTGAGGGATGGGTGATCAAAGAGGAGACGCCATCCCTTCTCGTTCTGGAATAATGGTCCAAATAATAAAGGATTTGAGCTGTTTTGTTTTG
MSSAAGRAPAPTPMGSADRCKSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAKDSSSNSSSGSSNLQVVQKRR
LLMGVEEAALLLMTLSSSPTSTLLHG
AACGCACACGGGCCGAAACTAAATT...
AACGCACACGGGCCGAAACTAAATTTCTCCAAGCGCGCAATCCTGTCGCCAACCCCGGCCACGGATCGGGGATGTCGTCTGCTGCGGGCCGCGCGCCGGCGCCGACGCCGATGGGCTCCGCCGATCGCTGTAAGTCACTTTGCAACGCCTGTGGGATCCGGTACCGAAAAAAGAGGAGGCAAGAGCTTGGCCTAGACCGCAAGCTGCAGCAACAACAAAATAATGGCGAGGCGAAGACGGATGAAGCAAAAGACAGCTCTAGCAACAGCAGCAGCGGGAGCAGCAACTTGCAGGTGGTGCAGAAACGGAGGCTGCTAATGGGAGTGGAGGAGGCTGCTCTGCTGCTGATGACCCTATCTTCTTCGCCCACATCCACGTTGCTTCATGGATAAGGACCCTCCTCCAACGCCAGATCAGCAGTGTACATACAACGTACCCCCTGCACAGTGACTGCCGAACGATTGCAGGCCTATCTCAGGGTTGTGTGATCTTGTGATTGGGGCGGATTATTAGTGCCAAGCTAATCACTCCGTTGATCGTCTTGTCTTCCTCTGTTTTCGCCGCACCCGTAGATCTTGATGCCAGCCAGCCATATATCTTCTACGTGATTTGTGGTAGGCTCCATAATCAGAGGTCTGTTGATCCCATTCCCCCCGCACATCTTTTTTCTCTTGTCTTTTCTCTTTTTGGTTTTTTGTATGTACTTTGATGTTGCCCCATTTGTGAGGGATGGGTGATCAAAGAGGAGACGCCATCCCTTCTCGTTCTGGAATAATGGTCCAAATAATAAAGGATTTGAGCTGTTTTGT
MGSADRCKIDGIVAAEKATRSCVECRATTTPMWRSGPTGPRSLCNACGIRYRKKRRQELGLDRKLQQQQNNGEAKTDEAK
DSSSNSSSGSSNLQVVQKRRLLMGVEEAALLLMTLSSSPTSTLLHG
CACACACATCCCCCTTCCCTTCCCT...
CACACACATCCCCCTTCCCTTCCCTTCCCCGCAACTACCCTCTACTCTCTACTGCACGCTTCTACTATCTAAGAAACAACGCACACGGGCCGAAACTAAATTTCTCCAAGCGCGCAATCCTGTCGCCAACCCCGGCCACGGATCGGGGATGTCGTCTGCTGCGGGCCGCGCGCCGGCGCCGACGCCGATGGGCTCCGCCGATCGCTGTAAGATCGACGGGATCGTGGCGGCGGAGAAAGCCACCAGGAGCTGCGTCGAATGCCGCGCCACCACCACGCCCATGTGGCGCAGCGGCCCGACCGGGCCCAGGTCACTTTGCAACGCCTGTGGGATCCGGTACCGAAAAAAGAGGAGGCAAGAGCTTGGCCTAGACCGCAAGCTGCAGCAACAACAAAATAATGGCGAGGCGAAGACGGATGAAGCAAAAGACAGCTCTAGCAACAGCAGCAGCGGGAGCAGCAACTTGCAGGTGGTGCAGAAACGGAGGCTGCTAATGGGAGTGGAGGAGGCTGCTCTGCTGCTGATGACCCTATCTTCTTCGCCCACATCCACGTTGCTTCATGGATAAGGACCCTCCTCCAACGCCAGATCAGCAGTGTACATACAACGTACCCCCTGCACAGTGACTGCCGAACGATTGCAGGCCTATCTCAGGGTTGTGTGATCTTGTGATTGGGGCGGATTATTAGTGCCAAGCTAATCACTCCGTTGATCGTCTTGTCTTCCTCTGTTTTCGCCGCACCCGTAGATCTTGATGCCAGCCAGCCATATATCTTCTACGTGATTTGTGGTAGGCTCCATAATCAGAGGTCTGTTGATCCCATTCCCCCCGCACATCTTTTTTCTCTTGTCTTTTCTCTTTTTGGTTTTTTGTATGTACTTTGATGTTGCCCCATTTGTGAGGGATGGGTGATCAAAGAGGAGACGCCATCCCTTCTCGTTCTGGAATAATGGTCCAAATAATAAAGGATTTGAGCTGTTTTGTTTTGTTT
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